Best time trial competitors based on the PCS time trial ranking.
| Pos. | Rider | Team | Points | Time trial ranking position |
|---|---|---|---|---|
| 1 | Marque Alejandro Manuel | OFM - Quinta da Lixa | 154 | 75 |
| 2 | César Veloso Gustavo | OFM - Quinta da Lixa | 49 | 260 |
| 3 | Sousa Sérgio Ferreira | Efapel - Glassdrive | 42 | 302 |
| 4 | Vilela Ricardo | Efapel - Glassdrive | 38 | 342 |
| 5 | Oyarzún Carlos Iván | Louletano - Dunas Douradas | 34 | 373 |
| 6 | Silva Daniel | Rádio Popular-Onda | 33 | 377 |
| 7 | Caldeira Samuel José | OFM - Quinta da Lixa | 30 | 408 |
| 8 | Pinto Edgar | LA Aluminios - Antarte | 30 | 435 |
| 9 | Silvestre Fábio | Leopard - Trek Continental Team | 27 | 473 |
| 10 | Thill Tom | Leopard - Trek Continental Team | 20 | 617 |
| 11 | Schlechter Pit | Leopard - Trek Continental Team | 16 | 731 |
| 12 | Ezquerra Jesús | Leopard - Trek Continental Team | 15 | 813 |
| 13 | Cardoso Filipe | Efapel - Glassdrive | 15 | 818 |
| 14 | Bekaert Steve | Burgos BH - Castilla y León | 14 | 823 |
| 15 | Silva Bruno | LA Aluminios - Antarte | 12 | 894 |