Best time trial competitors based on the PCS time trial ranking.
| Pos. | Rider | Team | Points | Time trial ranking position |
|---|---|---|---|---|
| 1 | Nishitani Taiji | Aisan Racing Team | 68 | 186 |
| 2 | Mori Kazuhiro | Aisan Racing Team | 26 | 479 |
| 3 | Mat Senan Mohammad Saufi | Terengganu Cycling Team | 21 | 604 |
| 4 | Lee Wei Cheng | Lapierre Asia Cycling Team | 18 | 714 |
| 5 | Anuar Aziz Mohamed Saiful | Terengganu Cycling Team | 12 | 861 |
| 6 | Rosdi Mohd Nor Umardi | Terengganu Cycling Team | 10 | 968 |